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Using this page

The tables below show which cell types have browser tracks for different data types in the combine Encode Roadmap browser. By default all, cell type rows are collapse into functional groups. Clicking on the group name will expand out all the cell types. The legend above shows what the colors of different squares mean.

Data can be viewed by clicking on data types at the top of the table, the squares for cell type groups and data types, the names of cell types in an expanded cell type group, or individual cell type and data type squares.

After selecting data, go to the bottom of the page to review what is selected and then click on the "Go to Browser" button.

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Cell Type DNase RNA-Seq DGF MRE MeDIP Methyl RRBS Methyl-seq ChIP-Input USF-1 USF-2 H2A.Z H2AK5ac H2AK9ac H2BK120ac H2BK12ac H2BK15ac H2BK20ac H2BK5ac H3K14ac H3K18ac H3K23ac H3K23me2 H3K27ac H3K27me3 H3K36me3 H3K4ac H3K4me1 H3K4me2 H3K4me3 H3K56ac H3K79me1 H3K79me2 H3K9ac H3K9me1 H3K9me3 H3T11ph H4K20me1 H4K5ac H4K8ac H4K91ac
ADRENAL ADRENAL -- DNase

ADRENAL -- Methyl RRBS

Blood Blood -- DNase Blood -- RNA-Seq Blood -- DGF Blood -- MRE Blood -- MeDIP Blood -- Methyl RRBS Blood -- Methyl-seq Blood -- ChIP-Input Blood -- USF-1 Blood -- USF-2 Blood -- H2A.Z

Blood -- H3K27ac Blood -- H3K27me3 Blood -- H3K36me3

Blood -- H3K4me1 Blood -- H3K4me2 Blood -- H3K4me3

Blood -- H3K79me2 Blood -- H3K9ac Blood -- H3K9me1 Blood -- H3K9me3

Blood -- H4K20me1

Bone Bone -- DNase

Bone -- Methyl RRBS

Bone -- H2A.Z

Bone -- H3K27ac Bone -- H3K27me3 Bone -- H3K36me3

Bone -- H3K4me1 Bone -- H3K4me2

Bone -- H3K79me2

Bone -- H3K9me3

Bone -- H4K20me1

BRAIN BRAIN -- DNase BRAIN -- RNA-Seq BRAIN -- DGF BRAIN -- MRE BRAIN -- MeDIP BRAIN -- Methyl RRBS

BRAIN -- ChIP-Input BRAIN -- USF-1

BRAIN -- H2A.Z

BRAIN -- H3K27ac BRAIN -- H3K27me3 BRAIN -- H3K36me3

BRAIN -- H3K4me1 BRAIN -- H3K4me2 BRAIN -- H3K4me3

BRAIN -- H3K79me2 BRAIN -- H3K9ac

BRAIN -- H3K9me3

BRAIN -- H4K20me1

BREAST BREAST -- DNase BREAST -- RNA-Seq BREAST -- DGF BREAST -- MRE BREAST -- MeDIP BREAST -- Methyl RRBS

BREAST -- ChIP-Input

BREAST -- H2A.Z

BREAST -- H3K27ac BREAST -- H3K27me3 BREAST -- H3K36me3

BREAST -- H3K4me1 BREAST -- H3K4me2 BREAST -- H3K4me3

BREAST -- H3K79me2 BREAST -- H3K9ac

BREAST -- H3K9me3

BREAST -- H4K20me1

Endothelia Endothelia -- DNase

Endothelia -- H3K4me3

Epithelial Epithelial -- DNase Epithelial -- RNA-Seq Epithelial -- DGF

Epithelial -- Methyl RRBS

Epithelial -- H3K27me3 Epithelial -- H3K36me3

Epithelial -- H3K4me3

ES CELLS ES CELLS -- DNase ES CELLS -- RNA-Seq ES CELLS -- DGF ES CELLS -- MRE ES CELLS -- MeDIP ES CELLS -- Methyl RRBS ES CELLS -- Methyl-seq ES CELLS -- ChIP-Input ES CELLS -- USF-1 ES CELLS -- USF-2 ES CELLS -- H2A.Z ES CELLS -- H2AK5ac

ES CELLS -- H2BK120ac ES CELLS -- H2BK12ac ES CELLS -- H2BK15ac ES CELLS -- H2BK20ac ES CELLS -- H2BK5ac ES CELLS -- H3K14ac ES CELLS -- H3K18ac ES CELLS -- H3K23ac ES CELLS -- H3K23me2 ES CELLS -- H3K27ac ES CELLS -- H3K27me3 ES CELLS -- H3K36me3 ES CELLS -- H3K4ac ES CELLS -- H3K4me1 ES CELLS -- H3K4me2 ES CELLS -- H3K4me3 ES CELLS -- H3K56ac ES CELLS -- H3K79me1 ES CELLS -- H3K79me2 ES CELLS -- H3K9ac

ES CELLS -- H3K9me3 ES CELLS -- H3T11ph ES CELLS -- H4K20me1 ES CELLS -- H4K5ac ES CELLS -- H4K8ac ES CELLS -- H4K91ac
ES-derived cells ES-derived cells -- DNase ES-derived cells -- RNA-Seq

ES-derived cells -- Methyl RRBS ES-derived cells -- Methyl-seq ES-derived cells -- ChIP-Input

ES-derived cells -- H2A.Z ES-derived cells -- H2AK5ac

ES-derived cells -- H2BK12ac

ES-derived cells -- H2BK5ac ES-derived cells -- H3K14ac ES-derived cells -- H3K18ac ES-derived cells -- H3K23ac

ES-derived cells -- H3K27ac ES-derived cells -- H3K27me3 ES-derived cells -- H3K36me3 ES-derived cells -- H3K4ac ES-derived cells -- H3K4me1 ES-derived cells -- H3K4me2 ES-derived cells -- H3K4me3

ES-derived cells -- H3K79me1 ES-derived cells -- H3K79me2 ES-derived cells -- H3K9ac

ES-derived cells -- H3K9me3

ES-derived cells -- H4K8ac ES-derived cells -- H4K91ac
EYE EYE -- DNase

EYE -- DGF

EYE -- Methyl RRBS

EYE -- H3K4me3

FAT

FAT -- ChIP-Input

FAT -- H3K27me3 FAT -- H3K36me3

FAT -- H3K4me1

FAT -- H3K4me3

FAT -- H3K9ac

FAT -- H3K9me3

Gastrointestinal Gastrointestinal -- DNase Gastrointestinal -- RNA-Seq Gastrointestinal -- DGF

Gastrointestinal -- Methyl RRBS Gastrointestinal -- Methyl-seq Gastrointestinal -- ChIP-Input

Gastrointestinal -- H3K27ac Gastrointestinal -- H3K27me3 Gastrointestinal -- H3K36me3

Gastrointestinal -- H3K4me1

Gastrointestinal -- H3K4me3

Gastrointestinal -- H3K9ac

Gastrointestinal -- H3K9me3

Genitourinary Genitourinary -- DNase Genitourinary -- RNA-Seq Genitourinary -- DGF

Genitourinary -- Methyl RRBS Genitourinary -- Methyl-seq

Genitourinary -- USF-2 Genitourinary -- H2A.Z

Genitourinary -- H3K27ac Genitourinary -- H3K27me3 Genitourinary -- H3K36me3

Genitourinary -- H3K4me1 Genitourinary -- H3K4me2 Genitourinary -- H3K4me3

Genitourinary -- H3K79me2 Genitourinary -- H3K9ac Genitourinary -- H3K9me1 Genitourinary -- H3K9me3

Genitourinary -- H4K20me1

HEART HEART -- DNase

HEART -- DGF

HEART -- Methyl RRBS

HEART -- ChIP-Input

HEART -- H3K27me3 HEART -- H3K36me3

HEART -- H3K4me1

HEART -- H3K4me3

HEART -- H3K9ac

HEART -- H3K9me3

Hematopoietic Stem Hematopoietic Stem -- DNase

Hematopoietic Stem -- DGF

Hematopoietic Stem -- Methyl RRBS

Hematopoietic Stem -- ChIP-Input

Hematopoietic Stem -- H3K27ac Hematopoietic Stem -- H3K27me3 Hematopoietic Stem -- H3K36me3

Hematopoietic Stem -- H3K4me1

Hematopoietic Stem -- H3K4me3

Hematopoietic Stem -- H3K9me3

iPS CELLS iPS CELLS -- DNase iPS CELLS -- RNA-Seq

iPS CELLS -- Methyl RRBS iPS CELLS -- Methyl-seq iPS CELLS -- ChIP-Input

iPS CELLS -- H3K27ac iPS CELLS -- H3K27me3 iPS CELLS -- H3K36me3

iPS CELLS -- H3K4me1

iPS CELLS -- H3K4me3

iPS CELLS -- H3K9ac

iPS CELLS -- H3K9me3

KIDNEY KIDNEY -- DNase

KIDNEY -- DGF

KIDNEY -- Methyl RRBS

KIDNEY -- ChIP-Input

KIDNEY -- H3K27me3 KIDNEY -- H3K36me3

KIDNEY -- H3K4me1

KIDNEY -- H3K4me3

KIDNEY -- H3K9ac

KIDNEY -- H3K9me3

LIVER LIVER -- DNase LIVER -- RNA-Seq LIVER -- DGF

LIVER -- Methyl RRBS LIVER -- Methyl-seq LIVER -- ChIP-Input LIVER -- USF-1 LIVER -- USF-2 LIVER -- H2A.Z

LIVER -- H3K27ac LIVER -- H3K27me3 LIVER -- H3K36me3

LIVER -- H3K4me1 LIVER -- H3K4me2 LIVER -- H3K4me3

LIVER -- H3K79me2 LIVER -- H3K9ac

LIVER -- H3K9me3

LIVER -- H4K20me1

LUNG LUNG -- DNase LUNG -- RNA-Seq LUNG -- DGF

LUNG -- Methyl RRBS LUNG -- Methyl-seq LUNG -- ChIP-Input LUNG -- USF-1

LUNG -- H2A.Z LUNG -- H2AK5ac LUNG -- H2AK9ac LUNG -- H2BK120ac LUNG -- H2BK12ac LUNG -- H2BK15ac LUNG -- H2BK20ac LUNG -- H2BK5ac LUNG -- H3K14ac LUNG -- H3K18ac LUNG -- H3K23ac

LUNG -- H3K27ac LUNG -- H3K27me3 LUNG -- H3K36me3 LUNG -- H3K4ac LUNG -- H3K4me1 LUNG -- H3K4me2 LUNG -- H3K4me3 LUNG -- H3K56ac LUNG -- H3K79me1 LUNG -- H3K79me2 LUNG -- H3K9ac LUNG -- H3K9me1 LUNG -- H3K9me3

LUNG -- H4K20me1 LUNG -- H4K5ac LUNG -- H4K8ac LUNG -- H4K91ac
MUSCLE MUSCLE -- DNase MUSCLE -- RNA-Seq MUSCLE -- DGF

MUSCLE -- Methyl RRBS

MUSCLE -- ChIP-Input

MUSCLE -- H2A.Z

MUSCLE -- H3K27ac MUSCLE -- H3K27me3 MUSCLE -- H3K36me3

MUSCLE -- H3K4me1 MUSCLE -- H3K4me2 MUSCLE -- H3K4me3

MUSCLE -- H3K79me2 MUSCLE -- H3K9ac

MUSCLE -- H3K9me3

MUSCLE -- H4K20me1

PLACENTA PLACENTA -- DNase

PLACENTA -- Methyl RRBS

SKIN SKIN -- DNase SKIN -- RNA-Seq SKIN -- DGF SKIN -- MRE SKIN -- MeDIP SKIN -- Methyl RRBS

SKIN -- ChIP-Input

SKIN -- H2A.Z

SKIN -- H3K27ac SKIN -- H3K27me3 SKIN -- H3K36me3

SKIN -- H3K4me1 SKIN -- H3K4me2 SKIN -- H3K4me3

SKIN -- H3K79me2 SKIN -- H3K9ac SKIN -- H3K9me1 SKIN -- H3K9me3

SKIN -- H4K20me1

SPLEEN SPLEEN -- DNase

STROMAL-CONNECTIVE STROMAL-CONNECTIVE -- DNase STROMAL-CONNECTIVE -- RNA-Seq STROMAL-CONNECTIVE -- DGF

STROMAL-CONNECTIVE -- Methyl RRBS

STROMAL-CONNECTIVE -- ChIP-Input

STROMAL-CONNECTIVE -- H3K27me3 STROMAL-CONNECTIVE -- H3K36me3

STROMAL-CONNECTIVE -- H3K4me1

STROMAL-CONNECTIVE -- H3K4me3

STROMAL-CONNECTIVE -- H3K9ac

STROMAL-CONNECTIVE -- H3K9me3

THYMUS THYMUS -- DNase